A model system to study the lignification process in Eucalyptus globulus.
Identifieur interne : 002397 ( Main/Exploration ); précédent : 002396; suivant : 002398A model system to study the lignification process in Eucalyptus globulus.
Auteurs : Pedro Araújo [Brésil] ; Igor Cesarino ; Juliana Lischka Sampaio Mayer ; Ilse Fernanda Ferrari ; Eduardo Kiyota ; Alexandra Christine Helena Frankland Sawaya ; Adriana Franco Paes Leme ; Paulo MazzaferaSource :
- Physiologia plantarum [ 1399-3054 ] ; 2014.
Descripteurs français
- KwdFr :
- Chromatographie en phase liquide (MeSH), Chromatographie en phase liquide à haute performance (MeSH), Eucalyptus (cytologie), Eucalyptus (effets des radiations), Eucalyptus (génétique), Eucalyptus (métabolisme), Lignine (métabolisme), Lumière (MeSH), Modèles biologiques (MeSH), Paroi cellulaire (métabolisme), Peroxidases (génétique), Peroxidases (métabolisme), Plant (cytologie), Plant (effets des radiations), Plant (génétique), Plant (métabolisme), Protéines végétales (génétique), Protéines végétales (métabolisme), Régulation de l'expression des gènes végétaux (MeSH), Saccharose (métabolisme), Spectrométrie de masse en tandem (MeSH).
- MESH :
- cytologie : Eucalyptus, Plant.
- effets des radiations : Eucalyptus, Plant.
- génétique : Eucalyptus, Peroxidases, Plant, Protéines végétales.
- métabolisme : Eucalyptus, Lignine, Paroi cellulaire, Peroxidases, Plant, Protéines végétales, Saccharose.
- Chromatographie en phase liquide, Chromatographie en phase liquide à haute performance, Lumière, Modèles biologiques, Régulation de l'expression des gènes végétaux, Spectrométrie de masse en tandem.
English descriptors
- KwdEn :
- Cell Wall (metabolism), Chromatography, High Pressure Liquid (MeSH), Chromatography, Liquid (MeSH), Eucalyptus (cytology), Eucalyptus (genetics), Eucalyptus (metabolism), Eucalyptus (radiation effects), Gene Expression Regulation, Plant (MeSH), Light (MeSH), Lignin (metabolism), Models, Biological (MeSH), Peroxidases (genetics), Peroxidases (metabolism), Plant Proteins (genetics), Plant Proteins (metabolism), Seedlings (cytology), Seedlings (genetics), Seedlings (metabolism), Seedlings (radiation effects), Sucrose (metabolism), Tandem Mass Spectrometry (MeSH).
- MESH :
- chemical , genetics : Peroxidases, Plant Proteins.
- chemical , metabolism : Lignin, Peroxidases, Plant Proteins, Sucrose.
- cytology : Eucalyptus, Seedlings.
- genetics : Eucalyptus, Seedlings.
- metabolism : Cell Wall, Eucalyptus, Seedlings.
- radiation effects : Eucalyptus, Seedlings.
- Chromatography, High Pressure Liquid, Chromatography, Liquid, Gene Expression Regulation, Plant, Light, Models, Biological, Tandem Mass Spectrometry.
Abstract
Recalcitrance of plant biomass is closely related to the presence of the phenolic heteropolymer lignin in secondary cell walls, which has a negative effect on forage digestibility, biomass-to-biofuels conversion and chemical pulping. The genus Eucalyptus is the main source of wood for pulp and paper industry. However, when compared to model plants such as Arabidopsis thaliana and poplar, relatively little is known about lignin biosynthesis in Eucalyptus and only a few genes were functionally characterized. An efficient, fast and inexpensive in vitro system was developed to study lignification in Eucalyptus globulus and to evaluate the potential role of candidate genes in this biological process. Seedlings were grown in four different conditions, in the presence or absence of light and with or without sucrose in the growth medium, and several aspects of lignin metabolism were evaluated. Our results showed that light and, to a lesser extent, sucrose induced lignin biosynthesis, which was followed by changes in S/G ratio, lignin oligomers accumulation and gene expression. In addition, higher total peroxidase activity and differential isoperoxidase profile were observed when seedlings were grown in the presence of light and sucrose. Peptide sequencing allowed the identification of differentially expressed peroxidases, which can be considered potential candidate class III peroxidases involved in lignin polymerization in E. globulus.
DOI: 10.1111/ppl.12152
PubMed: 24444279
Affiliations:
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wicri:level="4"><nlm:affiliation>Departamento de Biologia Vegetal, Instituto de Biologia, CP 6109, Universidade Estadual de Campinas, 13083-970 Campinas, SP, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Biologia Vegetal, Instituto de Biologia, CP 6109, Universidade Estadual de Campinas, 13083-970 Campinas, SP</wicri:regionArea><placeName><region type="state">État de São Paulo</region><settlement type="city">Campinas</settlement></placeName><orgName type="university">Université d'État de Campinas</orgName></affiliation></author><author><name sortKey="Cesarino, Igor" sort="Cesarino, Igor" uniqKey="Cesarino I" first="Igor" last="Cesarino">Igor Cesarino</name></author><author><name sortKey="Mayer, Juliana Lischka Sampaio" sort="Mayer, Juliana Lischka Sampaio" uniqKey="Mayer J" first="Juliana Lischka Sampaio" last="Mayer">Juliana Lischka Sampaio Mayer</name></author><author><name sortKey="Ferrari, Ilse Fernanda" sort="Ferrari, Ilse 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type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Cell Wall (metabolism)</term><term>Chromatography, High Pressure Liquid (MeSH)</term><term>Chromatography, Liquid (MeSH)</term><term>Eucalyptus (cytology)</term><term>Eucalyptus (genetics)</term><term>Eucalyptus (metabolism)</term><term>Eucalyptus (radiation effects)</term><term>Gene Expression Regulation, Plant (MeSH)</term><term>Light (MeSH)</term><term>Lignin (metabolism)</term><term>Models, Biological (MeSH)</term><term>Peroxidases (genetics)</term><term>Peroxidases (metabolism)</term><term>Plant Proteins (genetics)</term><term>Plant Proteins (metabolism)</term><term>Seedlings (cytology)</term><term>Seedlings (genetics)</term><term>Seedlings (metabolism)</term><term>Seedlings (radiation effects)</term><term>Sucrose (metabolism)</term><term>Tandem Mass Spectrometry (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Chromatographie en phase liquide (MeSH)</term><term>Chromatographie en phase liquide à haute performance (MeSH)</term><term>Eucalyptus (cytologie)</term><term>Eucalyptus (effets des radiations)</term><term>Eucalyptus (génétique)</term><term>Eucalyptus (métabolisme)</term><term>Lignine (métabolisme)</term><term>Lumière (MeSH)</term><term>Modèles biologiques (MeSH)</term><term>Paroi cellulaire (métabolisme)</term><term>Peroxidases (génétique)</term><term>Peroxidases (métabolisme)</term><term>Plant (cytologie)</term><term>Plant (effets des radiations)</term><term>Plant (génétique)</term><term>Plant (métabolisme)</term><term>Protéines végétales (génétique)</term><term>Protéines végétales (métabolisme)</term><term>Régulation de l'expression des gènes végétaux (MeSH)</term><term>Saccharose (métabolisme)</term><term>Spectrométrie de masse en tandem (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Peroxidases</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Lignin</term><term>Peroxidases</term><term>Plant Proteins</term><term>Sucrose</term></keywords><keywords scheme="MESH" qualifier="cytologie" xml:lang="fr"><term>Eucalyptus</term><term>Plant</term></keywords><keywords scheme="MESH" qualifier="cytology" xml:lang="en"><term>Eucalyptus</term><term>Seedlings</term></keywords><keywords scheme="MESH" qualifier="effets des radiations" xml:lang="fr"><term>Eucalyptus</term><term>Plant</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Eucalyptus</term><term>Seedlings</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Eucalyptus</term><term>Peroxidases</term><term>Plant</term><term>Protéines végétales</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Cell Wall</term><term>Eucalyptus</term><term>Seedlings</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Eucalyptus</term><term>Lignine</term><term>Paroi cellulaire</term><term>Peroxidases</term><term>Plant</term><term>Protéines végétales</term><term>Saccharose</term></keywords><keywords scheme="MESH" qualifier="radiation effects" xml:lang="en"><term>Eucalyptus</term><term>Seedlings</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Chromatography, High Pressure Liquid</term><term>Chromatography, Liquid</term><term>Gene Expression Regulation, Plant</term><term>Light</term><term>Models, Biological</term><term>Tandem Mass Spectrometry</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Chromatographie en phase liquide</term><term>Chromatographie en phase liquide à haute performance</term><term>Lumière</term><term>Modèles biologiques</term><term>Régulation de l'expression des gènes végétaux</term><term>Spectrométrie de masse en tandem</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Recalcitrance of plant biomass is closely related to the presence of the phenolic heteropolymer lignin in secondary cell walls, which has a negative effect on forage digestibility, biomass-to-biofuels conversion and chemical pulping. The genus Eucalyptus is the main source of wood for pulp and paper industry. However, when compared to model plants such as Arabidopsis thaliana and poplar, relatively little is known about lignin biosynthesis in Eucalyptus and only a few genes were functionally characterized. An efficient, fast and inexpensive in vitro system was developed to study lignification in Eucalyptus globulus and to evaluate the potential role of candidate genes in this biological process. Seedlings were grown in four different conditions, in the presence or absence of light and with or without sucrose in the growth medium, and several aspects of lignin metabolism were evaluated. Our results showed that light and, to a lesser extent, sucrose induced lignin biosynthesis, which was followed by changes in S/G ratio, lignin oligomers accumulation and gene expression. In addition, higher total peroxidase activity and differential isoperoxidase profile were observed when seedlings were grown in the presence of light and sucrose. Peptide sequencing allowed the identification of differentially expressed peroxidases, which can be considered potential candidate class III peroxidases involved in lignin polymerization in E. globulus. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24444279</PMID><DateCompleted><Year>2015</Year><Month>04</Month><Day>20</Day></DateCompleted><DateRevised><Year>2015</Year><Month>11</Month><Day>19</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1399-3054</ISSN><JournalIssue CitedMedium="Internet"><Volume>152</Volume><Issue>1</Issue><PubDate><Year>2014</Year><Month>Sep</Month></PubDate></JournalIssue><Title>Physiologia plantarum</Title><ISOAbbreviation>Physiol Plant</ISOAbbreviation></Journal><ArticleTitle>A model system to study the lignification process in Eucalyptus globulus.</ArticleTitle><Pagination><MedlinePgn>17-31</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/ppl.12152</ELocationID><Abstract><AbstractText>Recalcitrance of plant biomass is closely related to the presence of the phenolic heteropolymer lignin in secondary cell walls, which has a negative effect on forage digestibility, biomass-to-biofuels conversion and chemical pulping. The genus Eucalyptus is the main source of wood for pulp and paper industry. However, when compared to model plants such as Arabidopsis thaliana and poplar, relatively little is known about lignin biosynthesis in Eucalyptus and only a few genes were functionally characterized. An efficient, fast and inexpensive in vitro system was developed to study lignification in Eucalyptus globulus and to evaluate the potential role of candidate genes in this biological process. Seedlings were grown in four different conditions, in the presence or absence of light and with or without sucrose in the growth medium, and several aspects of lignin metabolism were evaluated. Our results showed that light and, to a lesser extent, sucrose induced lignin biosynthesis, which was followed by changes in S/G ratio, lignin oligomers accumulation and gene expression. In addition, higher total peroxidase activity and differential isoperoxidase profile were observed when seedlings were grown in the presence of light and sucrose. Peptide sequencing allowed the identification of differentially expressed peroxidases, which can be considered potential candidate class III peroxidases involved in lignin polymerization in E. globulus. </AbstractText><CopyrightInformation>© 2014 Scandinavian Plant Physiology Society.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Araújo</LastName><ForeName>Pedro</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>Departamento de Biologia Vegetal, Instituto de Biologia, CP 6109, Universidade Estadual de Campinas, 13083-970 Campinas, SP, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cesarino</LastName><ForeName>Igor</ForeName><Initials>I</Initials></Author><Author ValidYN="Y"><LastName>Mayer</LastName><ForeName>Juliana Lischka Sampaio</ForeName><Initials>JL</Initials></Author><Author ValidYN="Y"><LastName>Ferrari</LastName><ForeName>Ilse Fernanda</ForeName><Initials>IF</Initials></Author><Author ValidYN="Y"><LastName>Kiyota</LastName><ForeName>Eduardo</ForeName><Initials>E</Initials></Author><Author ValidYN="Y"><LastName>Sawaya</LastName><ForeName>Alexandra Christine Helena Frankland</ForeName><Initials>AC</Initials></Author><Author ValidYN="Y"><LastName>Paes Leme</LastName><ForeName>Adriana Franco</ForeName><Initials>AF</Initials></Author><Author ValidYN="Y"><LastName>Mazzafera</LastName><ForeName>Paulo</ForeName><Initials>P</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>03</Month><Day>11</Day></ArticleDate></Article><MedlineJournalInfo><Country>Denmark</Country><MedlineTA>Physiol Plant</MedlineTA><NlmUniqueID>1256322</NlmUniqueID><ISSNLinking>0031-9317</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>57-50-1</RegistryNumber><NameOfSubstance UI="D013395">Sucrose</NameOfSubstance></Chemical><Chemical><RegistryNumber>9005-53-2</RegistryNumber><NameOfSubstance UI="D008031">Lignin</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 1.11.1.-</RegistryNumber><NameOfSubstance UI="D010544">Peroxidases</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D002473" MajorTopicYN="N">Cell Wall</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002851" MajorTopicYN="N">Chromatography, High Pressure Liquid</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002853" MajorTopicYN="N">Chromatography, Liquid</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005052" MajorTopicYN="N">Eucalyptus</DescriptorName><QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000528" MajorTopicYN="N">radiation effects</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="Y">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008027" MajorTopicYN="N">Light</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008031" MajorTopicYN="N">Lignin</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008954" MajorTopicYN="N">Models, Biological</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010544" MajorTopicYN="N">Peroxidases</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D036226" MajorTopicYN="N">Seedlings</DescriptorName><QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000528" MajorTopicYN="N">radiation effects</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013395" MajorTopicYN="N">Sucrose</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D053719" MajorTopicYN="N">Tandem Mass Spectrometry</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>12</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2013</Year><Month>12</Month><Day>09</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>1</Month><Day>22</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>1</Month><Day>22</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2015</Year><Month>4</Month><Day>22</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">24444279</ArticleId><ArticleId IdType="doi">10.1111/ppl.12152</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Brésil</li></country><region><li>État de São Paulo</li></region><settlement><li>Campinas</li></settlement><orgName><li>Université d'État de Campinas</li></orgName></list><tree><noCountry><name sortKey="Cesarino, Igor" sort="Cesarino, Igor" uniqKey="Cesarino I" first="Igor" last="Cesarino">Igor Cesarino</name><name sortKey="Ferrari, Ilse Fernanda" sort="Ferrari, Ilse Fernanda" uniqKey="Ferrari I" first="Ilse Fernanda" last="Ferrari">Ilse Fernanda Ferrari</name><name sortKey="Kiyota, Eduardo" sort="Kiyota, Eduardo" uniqKey="Kiyota E" first="Eduardo" last="Kiyota">Eduardo Kiyota</name><name sortKey="Mayer, Juliana Lischka Sampaio" sort="Mayer, Juliana Lischka Sampaio" uniqKey="Mayer J" first="Juliana Lischka Sampaio" last="Mayer">Juliana Lischka Sampaio Mayer</name><name sortKey="Mazzafera, Paulo" sort="Mazzafera, Paulo" uniqKey="Mazzafera P" first="Paulo" last="Mazzafera">Paulo Mazzafera</name><name sortKey="Paes Leme, Adriana Franco" sort="Paes Leme, Adriana Franco" uniqKey="Paes Leme A" first="Adriana Franco" last="Paes Leme">Adriana Franco Paes Leme</name><name sortKey="Sawaya, Alexandra Christine Helena Frankland" sort="Sawaya, Alexandra Christine Helena Frankland" uniqKey="Sawaya A" first="Alexandra Christine Helena Frankland" last="Sawaya">Alexandra Christine Helena Frankland Sawaya</name></noCountry><country name="Brésil"><region name="État de São Paulo"><name sortKey="Araujo, Pedro" sort="Araujo, Pedro" uniqKey="Araujo P" first="Pedro" last="Araújo">Pedro Araújo</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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